SECTION 1
CHAPTER
3
  BIOL 2404 Online   
Introduction to Anatomy and Physiology
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LEARNING OBJECTIVES
 
  1. Read the Class Notes, using the Textbook illustrations to help understand the concepts.  Read the chapter using the Class Notes as your guide.  There are many questions included to help tie the systems and concepts together into an integrated, holistic understanding of anatomy and physiology.
  2. Take the Ch. 3 self test in the online textbook. DO NOT EMAIL THIS TEST TO YOUR INSTRUCTOR. It is a learning tool only.  These tests will also include questions that are NOT covered in this course.
  3. Use any resources on the Online Textbook, to integrate your learning.

Class Notes

Chapter 3: Cells

Use the diagrams in the book to enhance comprehension of these concepts.

Remember from chapter 1 – the cell is the basic unit of all living things? Since the cell is the building block of all living things – knowledge of the cells parts and the function of each is essential to understanding how the larger structure functions.

Let's expand Cell Theory (from Chapter 1)

A central tenant of biology is:
Cell
Theory - has three parts

1. Each cell maintains its own homeostasis.

The cell has a cell membrane which functions as a barrier
      between the internal cellular environment and the
      external, noncellular environment.
The cell, therefore, has the ability to control its INTERNAL
       environment regardless of the conditions outside the
       cell membrane.
The cell maintains an internal environment that is
       different from the environment outside the cell
       membrane - i.e. homeostasis.
The cell requires ENERGY to maintain this homeostasis.
       Maintaining homeostasis is an ACTIVE process - the
       cell must do 'work' to maintain homeostasis.


2. Each cell is produced by a previous cell.

A living cell can produce another living cell.
Energy is required to organize the molecules into
      organelles and then organize the organelles into a
      single unit with all the needed functions to support 'life'.
   NONliving things do NOT spontaneously begin to 'live'.
      Nonliving things CANNOT produce a thing that is alive.


3. The Cell is the basic structural unit of life.

All living things are made up of cells. 
   Single celled bacteria are the smallest structures with
      sufficient organization that the 5 characteristics of life
      are present.  This is due to the presence of sufficient
      organelles with the needed functions.
  All large organisms are multicellular.

The structural unit of NONliving things is the molecule.
     The molecule is the highest level of organization for
     nonliving things.

 

What is the basic structural and functional unit of the human body?
  How does 'Cell Theory' support the cell as the basic structural and functional unit of the human body?

What does the phrase 'central tenant' mean?
  Why is 'cell theory' a 'central tenant' of biology?
      Cell theory explains many of the 'characteristics of living things'.
         'Cell Theory' explains the concept of 'life' at a chemical, physical level.

 

Name the organic molecules that make up the cell membrane and state their functions

The cell membrane (CM) function is to regulate what goes into or out of the cell.
  It is composed of Lipids, Proteins and Carbohydrates.

As a BARRIER, the cell membrane protects the cell and acts as a filter to control entry into and exit from the cell.

List the organic molecules
(review Chapter 2, Organic molecules)

What is a phospholipid? (review Chapter 2, Organic molecules)
  What are the two parts of the phospholipid?
     What are the characteristics of it’s parts?

List the six types of proteins found in the cell membrane.
 
   These are listed and described further down on this webpage.
  What are their functions?

Cholesterol is extremely important in the cell membrane – it controls the ‘fluid-like’ nature of the CM. Too much cholesterol and the membrane is too rigid – too little and the membrane is too ‘loose’.

Carbohydrate molecules are bound to CM molecules such as phospholipids or anchor and identifier proteins. The carbohydrate functions as a point of attachment for other molecules or for stabilizing the cell membrane against other structures.

What is the function of the cell membrane?

State the arrangement of the molecules in the cell membrane

The cell membrane is also known as (aka):
      archaic terms:        cytolemma
                                       plasmalemma
                                       plasma membrane

    and terms still used today are:
                                      semi permeable membrane
                                      selectively permeable membrane

The Cell Membrane surrounds the cell and is a barrier between the things ‘outside’ the cell and the contents of the cell. The phospholipids are arranged in a phospholipid bilayer - two (2) layers of phospholipids with the phosphate heads on the external and internal surface and the lipid tails forming the inner layer of the CM.

See the diagrams in the book.

Because the phosphate heads are hydrophilic, polar molecules, then water, enzymes, ions, etc stick to them.

Because the lipid tails (the inner layer of the CM) are hydrophobic, the polar molecules on the surface cannot easily pass through the CM. The lipid tails form a BARRIER to the movement of polar molecules. Nonpolar molecules can pass easily through the CM’s lipid layer.

The Matrix (the most common component) of the CM is the phospholipids.
  

What is a 'Matrix'?
  The Matrix is the most common component of a system.

A grassland is called a grassland because GRASS is the most common component - i.e. the matrix of a grassland is 'grass'.
  There are flowers, shrubs and even 'trees' in the grassland,
  but the most common plant is a grass - therefore, it's a grassland.

What is a 'forest'?
  Are there any 'grasses' in the forest?
    What is the matrix of a 'forest'

What molecule is the 'matrix' of the Cell Membrane?
 What are the 'less common' molecules found in the matrix?

 

Embedded within the phospholipid matrix are protein molecules and cholesterol molecules.

The phospholipids move around each other in a ‘fluid’ like manner. The cholesterol in the membrane controls the movement (fluidity) of the other molecules, i.e. the cholesterol controls how easily the molecules within the cell membrane move around each other. 

Picture a swimming pool full of water with ping-pong balls floating side by side all over the surface of the water. Now, picture ‘stirring’ the water surface and the way that the ping-pong balls would move around on the surface without ‘mixing’ down into the water. Now, put a few tennis balls into the surface of ping-pong balls and stir it up. The tennis balls represent proteins ‘floating’ in the CM. Now, put a few soccer balls floating on the surface.  Add some basket balls, and beach balls.

Because the phospholipid molecules are somewhat ‘liquid’ and can move around one another, the protein molecules can also move around in the layer of phospholipids, within the layer, or from one side of the membrane to another.

List the names and terms by which the cell membrane is also known.

 

The Fluid Mosaic Model of the Cell Membrane is the name given to this arrangement of the molecules in the CM. It is a fluid because the molecules can move around. It is a mosaic because of the various types of proteins ‘floating’ in the CM.

                Review Chapter 2.
  Compare and contrast 'polar' and 'nonpolar' molecules.
    What type of substance 'repels' water?
What types of molecules cannot easily pass through the cell membrane?
    What is the characteristic of these molecules that does not 'fit' the 'barrier'?
    What is the characteristic of the barrier that allows the barrier to 'repel' these polar molecules?
What types of molecules CAN easily pass through the cell membrane?
    Why are they able to easily pass through the barrier?

   

Name the molecule that controls the 'fluidity' of the phospholipid bilayer.

 

State the six types of proteins in the cell membrane

There are 6 general classes of proteins found in the CM:

Anchors – anchor cells and cell structure to other cells or cell parts. Provide internal
       structure for the cell and move things around inside the cell.
Identifiers – identify a cell as either a foreign cell or a cell that is part of YOUR body.
Receptors – allow specific molecules or atoms to bind to the cell and stimulate
        chemical reactions.
Channels – allow specific molecules or atoms to pass through the cell membrane.
Carriers – transport specific molecules or atoms from one side of the cell membrane
         to the other.
Enzymes – molecules that promote controlled chemical reactions.

Remember - the CM is a barrier to polar ions and molecules – it is IMPERMEABLE to POLAR molecules.

The Channels and Carriers transport specific polar ions and molecules through the CM – they make the CM semi-permeable.

Semi-permeable means that some things can pass through the CM. Polar molecules must
        pass through a channel or be 'carried' by carriers.
Selectively permeable
means that the membrane controls what passes through it and is
        a synonym for semi-permeable.

Channel and Carrier molecules are PROTEINS.  Therefore, they have a specific shape and
        therefore, a specific function based on that specific shape.  (Review Chapter 2)
    A Na-channel only permits Na to pass through.
    A Ca-channel only permits Ca to pass through.
    A K-channel only permits K to pass through.

    A glucose carrier only carries glucose.

What is the function of the Channel and Carrier proteins?

NONpolar molecules diffuse easily through the nonpolar phospholipids of the CM.

 

                             Like dissolves like:
    Polar solvents dissolve polar ions and molecules.
         Water-soluble = polar ions are soluble in a polar solvent
            (water- the Universal solvent).
         Hydrophilic - water loving; water soluble
         Water dissolves polar molecules (Salt, sugar, proteins, etc)

    Nonpolar solvents dissolve nonpolar atoms and molecules.
         Lipid-soluble (fat soluble) - nonpolar molecules are soluble in a
             nonpolar solvent (oils, alcohol, gasoline, oil-based paint
              thinners, etc.)
         Hydrophobic - water hating/fearing; Lipid soluble
         Oil dissolves lipids (fat, cholesterol, etc)

 

List the Polar organic molecules.
  What is the polar solvent in the body?
         List the polar solutes.
         What are electrolytes?
List the NONpolar organic molecules.
  Name some NONpolar solvents.

 

Describe the cytoplasm

The Cytoplasm is the intracellular liquid and all the stuff dissolved or suspended in it.
  The liquid is H2O.
  There are many solutes, including nutrients (minerals, glucose, fat droplets, etc), wastes (from cellular processes), bits and pieces of proteins, etc in the cytoplasm - all these together with the liquid give the cytoplasm a colloid texture.

What are the constituents of the cytoplasm?
    What are the functions of each constituent?
       What is the ‘liquid’ of the cytoplasm?
         List the ions found in the cytoplasm. Hint: see the periodic table of the elements.
        List the macromolecules found in the cytoplasm.

 

Describe how the cell membrane regulates the composition of the cytoplasm

What is the function of the cell membrane?
  
See the description above of the cell membrane.

What is the primary component of the CM?
  How are these molecules ‘arranged’?
   Name the two parts and the ‘water’ characteristic of each part.
       What does the lipid ‘tail’ layer do?

Remember the six proteins found in the CM?
       List them.
  How do polar molecules pass through the CM?
  How do nonpolar molecules pass through the CM?

     

Explain isotonic, hypotonic, and hypertonic solutions and their effects on the cell

A solution is a mixture of a solvent and solutes.
     The solvent is the LIQUID part,
     The solutes are the particles dissolved in the liquid.

   ‘-tonic’ means ‘tension’ or in this case – concentration of solutes, atoms, or molecules.
   Iso
– means ‘same’
   Hyper
– more than or excess.
   Hypo
– less than or lower.

Isotonic – same tension – in other words –when you are talking about two solutions separated by a semipermeable membrane, the solution has the same concentration of solutes on each side of the membrane.

The intracellular solution (INSIDE the cell) is the point of reference. If you put a cell into a hypotonic solution – the intracellular fluid has a HIGHER concentration of solutes than the extracellular solution. If you put a cell into a hypertonic solution – the intracellular fluid has a LOWER concentration of solutes than the extracellular fluid.

Hypertonic – the solute concentration OUTside the membrane is greater than the solute concentration inside the membrane.

Hypotonic – the solute concentration INside the membrane is greater than the solute concentration OUTside the membrane.

What is another name for the solution outside the CM?
  
 extracellular
What is another name for the solution inside the CM?

Now – WHAT does this mean to the cell?

When the solution outside the cell has a higher concentration of solutes (i.e. lower concentration of water molecules)-
   - a solute concentration gradient exists across the CM - higher OUTSIDE and lower inside
                therefore, the solute wants to diffuse into the cell.
– AND
   - a water concentration gradient exists across the CM - higher INSIDE and lower outside
                therefore, the water wants to osmose OUT of the cell.

Solutes cannot easily pass through the CM – so what does water do?
Remember: the cell membrane is a selectively permeable barrier to solutes.  The gated channels and active transport processes create a solute concentration gradient across the cell membrane.
       (i.e. between the extracellular vs. intracellular fluids)

   Water wants to OSMOSE out of the cell.
      Why?
        Because the concentration of WATER molecules inside the cell is Higher than the concentration
             of water molecules OUTSIDE the cell.
  Therefore, water passes through the tiny channels in the CM that are open to water molecules.

What is the process called?
  
Osmosis

Define: crenation and plasmolysis.

How are these terms related to solute concentration in the intracellular and extracellular fluids?
  What happens when you put a cell into a hypertonic solution.
       
  Remember: the point of reference for the solution concentration is INTRACELLULAR fluid.
  What happens when you put a cell into a hypotonic solution?

Why is this an important concept?
  What type of 'solution' do EMT/EMS's and Paramedics give to accident victims who have lost blood volume?
  What type of 'solution' do hospitals give to patients to increase their blood volume?
ISOTONIC!
  Why?
    What would happen to a patient's body cells - and Red Blood Cells, if the patient recieved 'pure water'?

     

Define each of these cellular transport mechanisms and give an example of the role of each in the body: diffusion, osmosis, facilitated diffusion, active transport, filtration, phagocytosis and pinocytosis

Diffusion is the movement of solutes from an area of high concentration to an area of low concentration (from a solution that is highly concentrated with solute to an area where the solution has a lower concentration of solute). Picture putting a sugar cube into a glass of water – the sugar is all concentrated at first in the cube, the cube starts to dissolve but remains concentrated on the bottom of the glass. Without stirring, over time, the sugar will dissolve completely into the water and the sugar molecules will be evenly distributed throughout the water.

Diffusion follows a concentration gradient.
     What is a gradient?

        A gradient is a 'concentration that changes over some distance'.

   Picture a line that goes from

   Black ------->------------>---------->--  ------>--------->--------->------------>------->White
      
          BBG           BlkGr       GGB         Gray       GGW      GrWh        WWG

   100% black                              50% B and 50% W                                       100%W

The concentration of black going to gray and eventually to white is a ‘gradient’ - because the amount of black gradually decreases over the distance from 100% black to 0% black.

On the ‘black’ end is 100% black; in the middle is 50% B and 50% W; on the white end is 100% white.

We say that diffusion goes DOWN the concentration gradient because it goes from HIGH concentration to LOW concentration and is PASSIVE – i.e. it does not require energy and occurs in all systems whether living or nonliving. It is a purely chemical/physical process.

Osmosis is the diffusion of WATER through a semi-permeable membrane. In the body, the CM is the semi-permeable membrane.

Now -  let's change the above illustration with Black and White, so that:

Black = solutes ------------------------------- White = water

The concentration gradient of solute is toward pure water

i.e. High solute conc --------à ------à ----- low solute concentration.

While the concentration gradient of water is toward pure solute.

i.e. low water conc ---ß ----------ß --------- high water concentration

The main point here is that water flows toward a high solute concentration!
Remember - water is the SOLVENT in the solution, while the DISSOLVED SOLIDS are the solute.

Why is the solute gradient toward pure water?
If it is PURE water, then, by definition, there are NO solutes - i.e. 0, the lowest concentration of solute!
Why is the water gradient toward pure solute?
If it is PURE solute, then by definition, there are NO water molecules - i.e. 0, the lowest  concentration of water.

What makes it possible for the solutes to diffuse?
   Because they are dissolved in a liquid.
      What is the name of the liquid?
         Which two characteristics are we discussing here?

Each solute diffuses according to ITs concentration gradient.  Na+ diffuses ONLY due to the concentration of Na+.  K+ diffuses ONLY due to K+. Ca++, only due to Ca++.

In other words:
    The concentration of Ca++ does not affect the diffusion of other ions - it only affects
     the diffusion of Ca++.
    The concentration of Na+ does not affect the diffusion of other ions - ONLY Na+.

Living things concentrate solutes using energy...  and water PASSIVELY follows the solutes, because of the process of osmosis.

A HIGHLY concentrated solution, by definition, has LOTS of solute molecules, and therefore FEW solvent (water) molecules.

     Concentration - in this concept - refers to the number of SOLUTE
         molecules, not to the solvent.
      You can discuss the specific solute concentration (the number of
         molecules of one type of solute) - say... Na+, K+, Mg+, Cl-, (OH)-,
         or sugar, etc.
     You can discuss the TOTAL concentration of solutes - adding up
         all the molecules of all the solutes in the solution.
 

The TOTAL concentration (of solutes) in the solution drives Osmosis.

Osmosis is the diffusion of Water  - from an area with LOTS of
     WATER molecules to an area with fewer water molecules

    Water moves from a LOW Concentrated solution (lots of water
    molecules, FEW solutes) to a HIGH concentrated solution (few
    water molecules, LOTS of solutes)

Osmosis REQUIRES a semi permeable membrane - because the membrane allows the concentration of the solution to be 'different' on one side versus the other side.

The Cell Membrane is the semi permeable membrane -
    it's function is to regulate what gets into or out of the cell
The cell membrane permits the cell to maintain homeostasis of the cell's internal environment.

Osmosis is the FORCE that causes movement of water - but...
  HOW do water molecules enter the cell (pass through the cell membrane)?
     CHANNEL proteins in the CM allow the passage of water molecules.
  HOW do polar molecules pass through the cell membrane?
      Channel proteins (either gated or non-gated) allow polar molecules to pass through the
        cell membrane, down the concentration gradient of each respective solute.

    Osmosis is DIFFUSION of WATER... 
       What is the force that causes polar solutes to move through the channel proteins?
           DIFFUSION!

Diffusion (and Osmosis) are PASSIVE processes - they do NOT require energy, and take place any time there is even the slightest concentration gradient - until the system reaches equilibrium.

Equilibrium - there are NO differences in concentration- i.e. NO concentration gradients

Since no energy is required - these processes can occur in NONliving systems as well as in living systems.
        Indeed, 'life' can use the function of diffusion withOUT expending energy.

 

Active Transport – the transport of solutes from LOW solute concentration to HIGH solute concentration – AGAINST the concentration gradient.

This process REQUIRES Energy.

Living things concentrate solutes AGAINST the concentration gradient –
     HOW?

    By using energy.
      
What is the form of energy used for metabolic processes?
        What is metabolism?

The sodium/potassium pump, Na/K pump, is the Active Transport process that we will talk about most in this course.  The Na/K pump pumps 3 Na out of the cell, and 2 K into the cell.
   
What is its function?
    Is it active or passive?
           What does 'pump' mean?
              Is this an active or passive process?

Active Transport uses ENERGY to concentrate solutes on one side of a membrane - and WATER osmoses until the fluids on either side of the membrane are Isotonic, or in other words -  in equilibrium.

Active transport ONLY occurs in living systems - because only LIVING systems control and regulate the flow of energy through their systems.

'Life' must SPEND resources to make active transport take place.

'Life' must replace the resources that it 'spends'.

 

Facilitated Diffusion and Carrier Mediated Diffusion are the movement of solutes and suspended particles along the concentration gradient AIDED by special transport mechanisms.
   NOTE - these are both DIFFUSION processes - i.e. passive, and down a concentration gradient.
             Remember - 'Passive' means that the process does NOT need energy; and takes
                 place in both NONliving and living systems.

Glucose (sugar - THE major source of STORED energy) is moved into the cell by carrier mediated diffusion.  Glucose molecules are too large for normal diffusion to be effective.
   INSULIN increases the number of carrier proteins that can 'carry'
     glucose across the cell membrane into the cell.
   The more carriers you have, the faster things can enter the cell.

List the PASSIVE transport processes.
List the active transport processes.

Exocytosis – Secretion or excretion;  the mass movement of the stuff inside a vesicle in the cell out of the cell. The vesicle with contents moves to the CM, the vesicle fuses to the CM, opens a hole and dumps the contents into the extracellular fluid (outside the cell).

Endocytosis – the movement of large structures, esp bacteria and cell parts, into the cell. The CM gradually forms a fold around the structure and eventually completely surrounds the structure. The CM fuses and the structure is now in a large vesicle inside the cell. The cell attaches lysosomes to the vesicle, dumps lysozymes into it and digests the contents of the vesicle.

Macrophage - A cell that ingests extracellular substances. 
       '-phage' -  to eat
   Phagocytosis - cell 'eating' - moving solid particles into the cell -and subsequent digestion (eating)
         of those solids.
       Phagocyte - a cell that 'eats'.  AKA - macrophage, microphage, and other specialized names.
   Pinocytosis - cell 'drinking' - moving a 'liquid' into the cell, in a vesicle and subsequent use of that
          liquid.

What is Phagocytosis?
Pinocytosis?
What is a macrophage?

In phagocytosis, the cell must physically, intentionally, surround something outside the cell, and move it into the cell.
  Is this 'active' or 'passive'?
In exocytosis (excretion and secretion), the cell must intentionally move something to the cell membrane, open a 'hole' and dump the substance out of the cell.
  Is this 'active' or 'passive'?
   Compare and contrast excretion vs. secretion.

 

Describe the 'cellular transport' processes.

These cellular transport mechanisms are the FORCES that move small (molecule and atom size) particles within the body.

Basic Physics and Chemistry
     Diffusion
            Facilitated diffusion
            Carrier mediated diffusion
     Osmosis - requires a semipermeable membrane

Living cells -
     Using energy
         Active Transport
         Exocytosis
         Endocytosis
               Phagocytosis
               Pinocytosis

      No energy required (diffusion) - BUT requires special transport
      mechanisms.  Especially useful in the digestive system.
          Facilitated diffusion
          Carrier mediated diffusion

These forces operate at the atomic and molecular scale - the particles must be small enough that these forces can efficiently move them.

 

How is glucose moved INTO the cell - i.e. across the cell membrane?

 

State the function of the nucleus and chromosomes

The nucleus is the MEMBRANOUS organelle that houses the chromosomes inside the cell.  Each gene is transcribed and then that 'copy' passes out of the nucleus and is used in the cytoplasm.

What is a chromosome?
  
The chromosome is a molecule made up of 2 strands of DNA, wound around each other in a 'double' helix.
  What is the main component of a chromosome?
     Each DNA molecule is made up of GENEs.
       Each gene contains the information that makes each individual unique - the genetic code.

Describe the nuclear membrane.
    What is a nucleopore?
       Nucleopores are 'holes' in the nuclear membrane through which liquid and other molecules and substances pass between the liquid inside the nucleus and the cytoplasm.

 

Describe the function of the cell organelles

There are two main types of cell organelles:
   Nonmembranous do NOT have a membrane shape. They include structures made of proteins
     Cytoskeletion - support organelles inside the cell. Helps keep all the other organelles in their
          proper place relative to each other.
     Centrioles - cell reproduction
     Ribosomes - site of protein synthesis. 
            The workbench where new proteins are synthesized.

   Membranous organelles are based on a membrane that is very similar to the phospholipid bilayer
       of the CM.
     Nucleus - contains Chromosomes - DNA -  genes - genetic information
            produces mRNA -the recipe/instructions for making a protein
       Nucleolus- a dense area within the nucleus - production of ribosomes.
     Endoplasmic reticulum  (ER)
           RER - rough ER, Has Ribosomes attached - looks 'rough' under microscope
                - produces proteins from mRNA
           SER - smooth ER - no ribosomes attached - looks 'smooth' under microcope
                - produces lipids and new membranes using info from the RER.
                 - the workbench where new membranes (lipids) are produced.
      Golgi body - modifies and packages the proteins produced by the RER.
      Vesicles - the actual PACKAGE of substance produced by the Golgi body.
               Lysosome - a package of lysozymes (digestive enzymes)
                             Lysosomes are also called the 'digestive system of the cell'
                               because lysozymes are digestive enzymes.
               Peroxisome - a package of enzymes (peroxidase) that detoxify Oxygen atoms.

What is the function of the nucleopores?
Why is Rough ER called ‘rough’?
Why is Smooth ER called ‘smooth’?

L
ist the different types of vesicles and the function of each.
What is a lysosome?
          What is lysozyme?
What is a peroxisome?
          What is a peroxidase?
What is the 'digestive system' of the cell?
  What is the name of the digestive enzymes?
What is the workbench where proteins are produced?
What is the workbench where new membranes and lipids are produced?
   What is a ribosome?
   What is the SER?

The suffix ‘-some’ – means ‘body’ – therefore a lysosome is a ‘body’ that contains what substance?
       What does ‘lyse’ mean?
       What does ‘peroxi’ mean?
             Hint: what is hydrogen peroxide?

MAKE a TABLE to compare and contrast the Organelles and the specific, unique function of each.
   List each organelle (grouped as nonmembranous or membranous) and the function and location.

Villi - fingerlike structures on the surface of cells that increase the surface area of the cell.
  Microvilli - smaller fingerlike structures that increase cell surface area.

The more surface area available, the more secretion, excretion, and absorption possible.

Villi and microvilli increase the surface area and therefore increase the efficiency of absorption and secretion of that cell.
Microvilli are especially found on the surface of cells that are actively engaged in absorption -
    such as the lining of the digestive system.


What is the function of villi and microvilli?
   Where are villi and microvilli most likely to be found?
      Why is it advantageous to have microvilli on the surface of the cells lining the digestive tract?

 

Describe what happens in mitosis and meiosis and describe the importance of each

Make a TABLE to compare mitosis and meiosis

Mitosis and Meiosis are two different types of cell reproduction

Mitosis – produces normal body cells that are Diploid.  Function of mitosis is growth, maintenance and repair of normal body cells/tissues.

A single cell replicates all its organelles, especially the chromosomes, and then divides, producing two cells that are genetically and functionally identical to each other and to the original cell. These cells increase the size of the organ, or replace old, nonfunctional, or dead cells.

 

Meiosis – produces the SEX cells that are Haploid.  Function of meiosis is to ‘shuffle the genes’ and produce GAMETES that can fuse to a gamete from another individual to produce a new diploid organism with a unique genetic makeup.

A single cell replicates all its organelles, especially the chromosomes, and then Divides, separating the homologous chromatids into two separate cells, and then Divides again, this time separating sister chromatids putting one set into two cells. – This replication and then division and division starts with 1 (one) diploid cell and produces 4 (four) Haploid cells. (It copies itself and then divides 2 (two) times - producing cells with 1/2 the normal number of chromosomes)

Diploid means the cell has a full set of chromosomes.  Normal body cells in humans have 46 total chromosomes - or i.e. 23 pair of chromosomes. 
    Each pair is made up of a chromosome from the mother and one from the father.  Each individual
       has 2 (two) chromosomes in the first pair, 2 in the second, and so on...
    Each chromosome of a pair contains the genes that control the same trait.  I.e. if in a pair of
       chromosomes, the chromosome from the mother contains the gene for eye color, then the other
        chromosome (from the father) will also contain the gene for eye color.
 

    How many total chromosomes does a human body cell have?
     How many pairs of chromosomes does a normal human cell have?

Haploid means the cell has ½ of a full set. Haploid cells in humans are the SEX cells and are called Gametes. When two gametes (haploid cells) fuse following sexual intercourse they form a new DIPLOID cell – the zygote.

How many chromosomes is ‘1/2 of a full set’ of chromosomes in humans?

The zygote undergoes mitosis and becomes the embryo which, through more mitosis, becomes the fetus. Notice that mitosis is the process by which the zygote grows and matures into the subsequent stages.

How many chromosomes are in a diploid cell?  
How many chromosomes are in a haploid cell?
What is a chromosome?
How many pairs of chromosomes do humans have?
How many TOTAL chromosomes do humans have?

Where do we get our chromosomes?
  How many chromosomes does each parent give us?

Name the process that produces normal body cells for growth and development; and tissue repair.
Name the process that produces cells used for reproduction of the species.

 

Describe Protein Synthesis

DNA molecules are made up units called genes.

Genes are made up of a specific sequence of nucleotides (see chapter 2). This specific sequence codes for a specific sequence of amino acids for a protein.
    Remember, the repeating units for DNA molecules are the nucleotides.

Amino Acids (AA) are the building block of proteins.

The specific sequence of AAs give the protein a unique, specific shape.

The specific shape of the protein gives that protein a specific function.

The specific sequence of AAs that make up a protein, is determined by the specific sequence of nucleotides on the DNA.

What happens when you change the shape of the protein?
What are some conditions that can change the shape of the protein?
     Temperature, pH, pressure
  What is a mutation?
    
    A mutation is a change in the sequence of nucleotides that make up a gene.
     How would this affect the sequence of nucleotides and in turn the sequence of AAs?
         Changing the sequence of nucleotides, can change the sequence of amino acids - which
           can produce a protein with a new shape and therefore a different function.
         What happens when you change the shape of a protein?
           What does 'denature' mean?

Chromosomes are found in the nucleus of the cell and are made up of DNA. 

A gene is a segment of DNA that codes for a specific protein. Each gene codes for only one (1) protein.  A protein is a chain of amino acids - the chain of amino acids are arranged in a specific order.

A central tenant of biology is:
ONE gene produces ONE protein.

 

DNA makes up chromosomes in the Nucleus. The DNA molecule is two strings of nucleotides wound around each other in a 'double helix' shape.  Picture a corded telephone cord - the helical cord that allows the phone to 'stretch' away from the phone base.  The nucleotides that make up a strand are covalently bonded to each other.  The two strands of nucleotides are held together by H-bonds between adjacent nucleotides (one on each strand).  This means that it is difficult to break a strand, but easy to pull the two strands apart.

Each strand is a sequence of nucleotides. 

There are four (4) nucleotides that make up DNA.

1. Adenosine (A) and 2. Thymine (T)
3. Guanine (G) and 4. Cytosine (C)

There are 4 nucleotides that make up an RNA molecule:

1. Adenosine (A) and 2. Uracil (U)
3. Guanine (G) and 4. Cytosine (C)

See the diagrams of a DNA molecule in your textbook.
      Notice that there are two strands of DNA, wound around in HELIX. 
                 Further, each strand is a chain of nucleotides, AND
                 the each nucleotide of each strand shares a Hydrogen Bond with a nucleotide
                      on the opposite strand.

The Rule of Complementary Base Pairing states that:

on a DNA molecule, Adenosine on one DNA strand always pairs (H-bonds) with Thymine on the opposite strand of DNA; while Cytosine on one strand always pairs with Guanine on the other strand.  I.e. when A occurs on one strand of DNA, it will be H-bonded to T on the other strand.on an RNA molecule, the Thymine nucleotide is replaced by the nucleotide Uracil.  Therefore an A on DNA produces a U on an mRNA molecule. 

The DNA molecule strands - split- i.e. the H-bonds break -and one strand is transcribed (copied) to form a mRNA molecule.  The mRNA molecule is translated into a protein. 
    Remember that the repeating unit for DNA and RNA are the nucleotides and the repeating unit
        for proteins is the AAs? 
      In translation, the nucleotide sequence produces a sequence of AAs.
         Transcription -the process of producing an RNA molecule (from a DNA template).
          Translation -the process of producing a protein from an RNA recipe.

How does a DNA molecules contain information?
The specific sequence of nucleotides on a DNA strand is the 'recipe' for a specific protein. Remember from above - 1 gene codes for 1 protein?  The sequence of nucleotides that make up a gene is the 'recipe' for a specific sequence of amino acids in a chain.
   Remember from chapter 3 that a protein has a specific function that depends on the specific
      sequence of AAs? 
    How is that specific sequence of AAs created?

       The specific sequence of nucleotides that make up a gene!

Consider the English alphabet - picture a sequence of letters of the alphabet: 
   ttttthheeebbiiggcaaar  - this sequence has no meaing –

NOW, rearrange the letters to: thebigcatatethebigrat (put some spaces in between the 'words' and- the big cat ate the big rat).


The SEQUENCE of letters is a 'word' that has a specific meaning and a string of 'words' creates a sentence with a specific meaning.

Nucleotides are the 'letters' of DNA.  There are only 4 'letters' in the DNA alphabet - A, T, C, and G.  These letters (nucleotides) are arranged in a specific sequence, in groups of 3 nucleotides called 'triplets'. 

Triplets are the 'words'.
Each triplet codes (means) for a specific AA in the chain of AAs that make up a protein.

DNA is transcribed (copied)
       to mRNA which is translated (used as a recipe for)
           into a protein.

DNA cannot leave the nucleus, therefore, the nucleotide sequence of DNA is copied to mRNA, which travels out of the nucleus and binds to a ribosome.  There, the mRNA copy directs the synthesis of a specific sequence of AAs - i.e. a specific protein with a specific shape.

How does DNA contain information?
  The information is contained in the SPECIFIC SEQUENCE of the nucleotides that make up a gene.
     The specific sequence of nucleotides produces a protein with a specific sequence of amino acids.
        That specific sequence of amino acids produces a protein with a specific shape -which gives
         the protein a specific (unique!) function.

If the nucleotides get out of sequence, then the gene 'loses meaning' - and produces a different sequence of AAs - and therefore a protein that is nonfunctional.
  
Remember the 6 types of proteins?
     List them and the functions of each type.

       What is an enzyme?
         What is the function of an enzyme?
           What happens if the 'shape' of the enzyme changes?
             How would this 'stop' metabolism?


 

LAB

Cellular Anatomy

  • Cell Membrane
    • Lipids
    • Proteins
  • Cytoplasm
    • Cytosol - the solution - fluid
      - solvent - made up of H2O
      - solutes - nutrients, wastes, molecules, etc. dissolved in the solvent
  • Organelles - molecules 'suspended' in the solution
    • Non-membranous Organelles
      • Microvilli
      • cytoskeleton
      • Cilia
      • Centrioles
      • Ribosomes
    • Membranous Organelles
      • Endoplasmic Reticulum (ER)
        • Smooth ER
        • Rough ER
      • Golgi Apparatus
      • Lysosomes
      • Mitochondria
      • Nucleus
      • Nucleolus
  •  

     

   

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